USP18

USP18
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 5CHT, 5CHV
Identifiers
Aliases	USP18, ISG43, UBP43, ubiquitin specific peptidase 18, PTORCH2
External IDs	OMIM: 607057; MGI: 1344364; HomoloGene: 8047; GeneCards: USP18; OMA:USP18 - orthologs
Gene location (Human) Chr. Chromosome 22 (human)[1] Band 22q11.21 Start 18,150,170 bp[1] End 18,177,397 bp[1]
Gene location (Mouse) Chr. Chromosome 6 (mouse)[2] Band 6 F1|6 57.17 cM Start 121,222,865 bp[2] End 121,247,876 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in gonad left testis right testis testicle subcutaneous adipose tissue liver lymph node right lobe of liver islet of Langerhans placenta Top expressed in mucous cell of stomach transitional epithelium of urinary bladder decidua thymus seminal vesicula granulocyte submandibular gland mesenteric lymph nodes lumbar spinal ganglion islet of Langerhans More reference expression data BioGPS More reference expression data
Gene ontology Molecular function peptidase activity cysteine-type peptidase activity protein binding hydrolase activity thiol-dependent deubiquitinase ISG15-specific protease activity cysteine-type endopeptidase activity Cellular component cytoplasm nucleus cytosol Biological process regulation of type I interferon-mediated signaling pathway ubiquitin-dependent protein catabolic process proteolysis protein deubiquitination regulation of inflammatory response regulation of protein stability Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 11274 24110 Ensembl ENSG00000184979 ENSMUSG00000030107 UniProt Q9UMW8 Q9WTV6 RefSeq (mRNA) NM_017414 NM_011909 RefSeq (protein) NP_059110 NP_036039 Location (UCSC) Chr 22: 18.15 – 18.18 Mb Chr 6: 121.22 – 121.25 Mb PubMed search [3] [4]
Wikidata
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Ubiquitin specific peptidase 18 (USP18), also known as UBP43, is a type I interferon receptor repressor and an isopeptidase. In humans, it is encoded by the USP18 gene.^[5] USP18 is induced by the immune response to type I and III interferons, and serves as a negative regulator of type I interferon, but not type III interferon. Loss of USP18 results in increased responsiveness to type I interferons and life-threatening autoinflammatory disease in humans due to the negative regulatory function of USP18 in interferon signal transduction. Independent of this activity, USP18 is also a member of the deubiquitinating protease family of enzymes. It is known to remove ISG15 conjugates from a broad range of protein substrates, a process known as deISGylation.^[5]

Structure

The USP18 gene consists of 11 exons that encode a 43 kDa protein. The USP18 protein adopts the characteristic hand-like structure of ubiquitin-specific-proteases (USPs), which consists of a finger, palm and thumb domain. At the interface of the palm and thumb domain lies the catalytic site composed of the cysteine protease triad (cysteine, a histidine and an aspartate or asparagine).^[6] The C-terminus of USP18 is primarily responsible for negative regulation of interferon-I signaling.^[7]

Function

Following its induction by type I interferons (IFN-Is), USP18 carries out three functional interactions:

Regulation of IFN-I signaling

USP18 inhibits IFN-I signaling by disrupting the receptor complex and the subsequent JAK-STAT signaling pathway. USP18 binds the IFN-receptor 2 subunit (IFNAR2), leading to the displacement of Janus kinase 1.^[7][8] and the dissociation of the cytokine-receptor complex.^[9] This process requires STAT2 to traffic USP18 to the receptor ^[10][11][12] These events terminate signaling and draw cells into a refractory state with diminished sensitivity to future stimulation.^[8]

deISGylation

Using the isopeptidase domain, USP18 specifically deconjugates ISG15 (interferon-stimulated gene 15) from tagged proteins.^[13] This reaction is termed deISGylation, as the initial conjugation of ISG15 to newly synthesized proteins is termed ISGylation, a process akin to ubiquitination. However, unlike other de-ubiquitinating enzymes, USP18 is specific to ISG15, and exhibits no cross-reactivity with ubiquitin. The consequences of ISGylation and deISGylation are incompletely understood.^[14]

Stabilization

USP18 is stabilized by ISG15, but independently of the ubiquitin-like conjugation.^[15] Without ISG15-mediated stabilization, USP18 is degraded at the proteasome. This relationship exists in human, canine and porcine USP18/ISG15,^[16] but is absent in murine systems.^[17]

Promoting factor of HIV infection

Macrophages and dendritic cells are usually the first point of contact with pathogens, including lentiviruses. Host restriction factors, including SAMHD1, mediate the innate immune response against these viruses. However, HIV-1 has evolved to circumvent the innate immune response and establishes disseminated infection. It was reported that human USP18 is a novel factor potentially contributing to HIV replication by blocking the antiviral function of p21 in differentiated human myeloid cells. USP18 downregulates p21 protein expression, which correlates with upregulated intracellular dNTP levels and the antiviral inactive form of SAMHD1. Depletion of USP18 stabilizes p21 protein expression, which correlates with dephosphorylated SAMHD1 and a block to HIV-1 replication.^{[18][19][20][21][22]}

Clinical significance

USP18-deficiency is a very rare primary immunodeficiency caused by mutations of the USP18 gene. The inheritance is autosomal recessive. The clinical disease presents in the perinatal period with life-threatening autoinflammation that mimics TORCH infections, but in the absence of infection. The severe inflammation results from a failure to regulate type I IFN activity, and is therefore considered a type I interferonopathy. This syndrome was initially described to result in death within weeks of birth.^[23] Fortunately, this previously lethal condition was recently demonstrated to be curable with a Janus kinase inhibitor and intensive supportive care.^[24]

References

Further reading