PPM1A

Protein-coding gene in the species Homo sapiens

PPM1A

Available structures

PDB

Ortholog search: PDBe RCSB

List of PDB id codes
1A6Q, 3FXJ, 3FXK, 3FXL, 3FXM, 3FXO, 4RA2, 4RAF, 4RAG

Identifiers

Aliases

PPM1A, PP2C-ALPHA, PP2CA, PP2Calpha, protein phosphatase, Mg2+/Mn2+ dependent 1A

External IDs

OMIM: 606108; MGI: 99878; HomoloGene: 56428; GeneCards: PPM1A; OMA:PPM1A - orthologs

Gene location (Human)

Chr.	Chromosome 14 (human)^[1]

Band	14q23.1	Start	60,245,752 bp^[1]
Band	14q23.1	End	60,299,087 bp^[1]

Gene location (Mouse)

Chr.	Chromosome 12 (mouse)^[2]

Band	12\|12 C3	Start	72,757,455 bp^[2]
Band	12\|12 C3	End	72,799,819 bp^[2]

RNA expression pattern

Bgee

Human

Mouse (ortholog)

Top expressed in

sperm

oocyte

biceps brachii

secondary oocyte

Skeletal muscle tissue of biceps brachii

jejunal mucosa

amniotic fluid

parotid gland

left testis

glutes

Top expressed in

muscle of thigh

morula

substantia nigra

otic placode

spermatid

neural layer of retina

dentate gyrus of hippocampal formation granule cell

triceps brachii muscle

digastric muscle

superior frontal gyrus

More reference expression data

BioGPS


More reference expression data

Gene ontology
Molecular function	R-SMAD binding phosphoprotein phosphatase activity manganese ion binding protein serine/threonine phosphatase activity calmodulin-dependent protein phosphatase activity signal transducer activity metal ion binding catalytic activity protein binding cation binding hydrolase activity magnesium ion binding
Cellular component	cytoplasm membrane nucleoplasm nucleus cytosol plasma membrane
Biological process	cellular response to transforming growth factor beta stimulus peptidyl-threonine dephosphorylation negative regulation of SMAD protein complex assembly protein dephosphorylation negative regulation of transforming growth factor beta receptor signaling pathway Wnt signaling pathway negative regulation of transcription by RNA polymerase II negative regulation of I-kappaB kinase/NF-kappaB signaling negative regulation of BMP signaling pathway positive regulation of protein export from nucleus positive regulation of Wnt signaling pathway positive regulation of transcription, DNA-templated N-terminal protein myristoylation positive regulation of I-kappaB kinase/NF-kappaB signaling dephosphorylation
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse

Entrez


5494


19042

Ensembl


ENSG00000100614


ENSMUSG00000021096

UniProt


P35813


P49443

RefSeq (mRNA)


NM_021003 NM_177951 NM_177952


NM_008910

RefSeq (protein)


NP_066283 NP_808820 NP_808821


NP_032936

Location (UCSC)

Chr 14: 60.25 – 60.3 Mb

Chr 12: 72.76 – 72.8 Mb

PubMed search

^[3]

^[4]

Wikidata

View/Edit Human

View/Edit Mouse

Protein phosphatase 1A is an enzyme that in humans is encoded by the PPM1A gene.^[5]^[6]

The protein encoded by this gene is a member of the PP2C family of Ser/Thr protein phosphatases. PP2C family members are known to be negative regulators of cell stress response pathways. This phosphatase dephosphorylates, and negatively regulates the activities of, MAP kinases and MAP kinase kinases. It has been shown to inhibit the activation of p38 and JNK kinase cascades induced by environmental stresses. This phosphatase can also dephosphorylate cyclin-dependent kinases, and thus may be involved in cell cycle control. Overexpression of this phosphatase is reported to activate the expression of the tumor suppressor gene TP53/p53, which leads to G2/M cell cycle arrest and apoptosis. Three alternatively spliced transcript variants encoding two distinct isoforms have been described.^[6]

Interactions

PPM1A has been shown to interact with Metabotropic glutamate receptor 3.^[7] In 2006, Dr. Feng found that PPM1A can terminate TGF-beta signaling by inactivating Smad3 via dephosphorylation. Smad3 is an essential component of the TGF-beta signalling pathway.

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000100614 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000021096 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Mann DJ, Campbell DG, McGowan CH, Cohen PT (February 1992). "Mammalian protein serine/threonine phosphatase 2C: cDNA cloning and comparative analysis of amino acid sequences". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1130 (1): 100–4. doi:10.1016/0167-4781(92)90471-b. PMID 1311954.
^ ^a ^b "Entrez Gene: PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform".
^ Flajolet M, Rakhilin S, Wang H, Starkova N, Nuangchamnong N, Nairn AC, Greengard P (December 2003). "Protein phosphatase 2C binds selectively to and dephosphorylates metabotropic glutamate receptor 3". Proceedings of the National Academy of Sciences of the United States of America. 100 (26): 16006–11. Bibcode:2003PNAS..10016006F. doi:10.1073/pnas.2136600100. PMC 307683. PMID 14663150.

Redpath NT, Price NT, Severinov KV, Proud CG (April 1993). "Regulation of elongation factor-2 by multisite phosphorylation". European Journal of Biochemistry. 213 (2): 689–99. doi:10.1111/j.1432-1033.1993.tb17809.x. PMID 8386634.
Das AK, Helps NR, Cohen PT, Barford D (December 1996). "Crystal structure of the protein serine/threonine phosphatase 2C at 2.0 A resolution". The EMBO Journal. 15 (24): 6798–809. doi:10.1002/j.1460-2075.1996.tb01071.x. PMC 452505. PMID 9003755.
Takekawa M, Maeda T, Saito H (August 1998). "Protein phosphatase 2Calpha inhibits the human stress-responsive p38 and JNK MAPK pathways". The EMBO Journal. 17 (16): 4744–52. doi:10.1093/emboj/17.16.4744. PMC 1170803. PMID 9707433.
Fjeld CC, Denu JM (July 1999). "Kinetic analysis of human serine/threonine protein phosphatase 2Calpha". The Journal of Biological Chemistry. 274 (29): 20336–43. doi:10.1074/jbc.274.29.20336. PMID 10400656.
Hishiya A, Ohnishi M, Tamura S, Nakamura F (September 1999). "Protein phosphatase 2C inactivates F-actin binding of human platelet moesin". The Journal of Biological Chemistry. 274 (38): 26705–12. doi:10.1074/jbc.274.38.26705. PMID 10480873.
Cheng A, Ross KE, Kaldis P, Solomon MJ (November 1999). "Dephosphorylation of cyclin-dependent kinases by type 2C protein phosphatases". Genes & Development. 13 (22): 2946–57. doi:10.1101/gad.13.22.2946. PMC 317162. PMID 10580002.
Strovel ET, Wu D, Sussman DJ (January 2000). "Protein phosphatase 2Calpha dephosphorylates axin and activates LEF-1-dependent transcription". The Journal of Biological Chemistry. 275 (4): 2399–403. doi:10.1074/jbc.275.4.2399. PMID 10644691.
Lifschitz-Mercer B, Sheinin Y, Ben-Meir D, Bramante-Schreiber L, Leider-Trejo L, Karby S, Smorodinsky NI, Lavi S (July 2001). "Protein phosphatase 2Calpha expression in normal human tissues: an immunohistochemical study". Histochemistry and Cell Biology. 116 (1): 31–9. doi:10.1007/s004180100291. PMID 11479720. S2CID 1692505.
Srivastava J, Goris J, Dilworth SM, Parker PJ (April 2002). "Dephosphorylation of PKCdelta by protein phosphatase 2Ac and its inhibition by nucleotides". FEBS Letters. 516 (1–3): 265–9. doi:10.1016/S0014-5793(02)02500-0. PMID 11959144.
Ofek P, Ben-Meir D, Kariv-Inbal Z, Oren M, Lavi S (April 2003). "Cell cycle regulation and p53 activation by protein phosphatase 2C alpha". The Journal of Biological Chemistry. 278 (16): 14299–305. doi:10.1074/jbc.M211699200. PMID 12514180.
Matsuda A, Suzuki Y, Honda G, Muramatsu S, Matsuzaki O, Nagano Y, Doi T, Shimotohno K, Harada T, Nishida E, Hayashi H, Sugano S (May 2003). "Large-scale identification and characterization of human genes that activate NF-kappaB and MAPK signaling pathways". Oncogene. 22 (21): 3307–18. doi:10.1038/sj.onc.1206406. PMID 12761501. S2CID 38880905.
Flajolet M, Rakhilin S, Wang H, Starkova N, Nuangchamnong N, Nairn AC, Greengard P (December 2003). "Protein phosphatase 2C binds selectively to and dephosphorylates metabotropic glutamate receptor 3". Proceedings of the National Academy of Sciences of the United States of America. 100 (26): 16006–11. Bibcode:2003PNAS..10016006F. doi:10.1073/pnas.2136600100. PMC 307683. PMID 14663150.
Yoshizaki T, Maegawa H, Egawa K, Ugi S, Nishio Y, Imamura T, Kobayashi T, Tamura S, Olefsky JM, Kashiwagi A (May 2004). "Protein phosphatase-2C alpha as a positive regulator of insulin sensitivity through direct activation of phosphatidylinositol 3-kinase in 3T3-L1 adipocytes". The Journal of Biological Chemistry. 279 (21): 22715–26. doi:10.1074/jbc.M313745200. PMID 15016818.
Li D, Wang F, Lai M, Chen Y, Zhang JF (February 2005). "A protein phosphatase 2calpha-Ca2+ channel complex for dephosphorylation of neuronal Ca2+ channels phosphorylated by protein kinase C". The Journal of Neuroscience. 25 (8): 1914–23. doi:10.1523/JNEUROSCI.4790-04.2005. PMC 6726054. PMID 15728831.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
Kitajima TS, Sakuno T, Ishiguro K, Iemura S, Natsume T, Kawashima SA, Watanabe Y (May 2006). "Shugoshin collaborates with protein phosphatase 2A to protect cohesin". Nature. 441 (7089): 46–52. Bibcode:2006Natur.441...46K. doi:10.1038/nature04663. PMID 16541025. S2CID 4425074.